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Details can be found in the following manuscript. Contact author Brooks for further inquiries. Brooks, J. M., Baxter, C. V., Warren, D. R., & MacNeill, K. L. (2025). Enter the Mosaic: Aquatic‐Terrestrial Reciprocal Fluxes and Food Webs Are Dynamically Interdependent Across Space and Through Time. Freshwater Biology, 70(9), e70094. 

ABSTRACT Decades‐old research describes dynamic interdependence among aquatic and terrestrial food webs, leading to calls for integrating cross‐ecosystem linkages with landscape ecology to evaluate dynamics of spatially‐subsidised food webs. Though development of meta‐community theory has suggested that such spatial dynamics may help sustain biodiversity, empirical data remain limited. In northern Yellowstone National Park, over a century of terrestrial wildlife dynamics, including the extirpation and subsequent reintroduction of wolves, have contributed to a habitat mosaic in which stream‐riparian ecosystems are dominated by either woody or herbaceous vegetation. In the context of this habitat mosaic, we addressed the overarching questions: (1) Are habitat mosaics associated with spatial and temporal variation in reciprocal fluxes and linked food webs and (2) how do biodiversity, organism traits and species interactions influence, and are they influenced by, that spatial and temporal variation?From 2019 to 2021, we intensively sampled eight headwater streams to characterise reciprocal fluxes of aquatic and terrestrial invertebrates and the patterns of potential responses by fish, birds, bats and spiders. We evaluated sites individually as well as how they contributed to a meta‐community.We found that local stream‐riparian ecosystems contributed to a mosaic in which reciprocal fluxes of invertebrates among local patches were asynchronous and tracked by both aquatic and terrestrial consumers in ways mediated by organism traits. Within sites, aquatic and terrestrial invertebrate fluxes were seasonally asynchronous with each other, but these patterns varied from site to site. Across the mosaic, comparisons of daily aquatic insect emergence varied from 25% to 167% among streams and did so variably throughout the year, revealing asynchronous dynamics created at the meta‐community scale. Daily inputs of terrestrial invertebrates were similarly asynchronous across the mosaic, varying from 14% to 170%. These asynchronies were positively correlated with invertebrate beta diversity and associated with varying riparian vegetation, stream temperature, and flow regimes. In turn, in situ consumers tracked the allochthonous invertebrate prey in ways that were mediated by site context (i.e., local habitat characteristics) and consumer traits (e.g., range, foraging strategy and breeding requirements).Based on these observations as an example, we infer there is not one way for food webs to be reciprocally and spatially linked, but multiple ways that can vary both across a spatial mosaic and through time. Our findings provide empirical evidence suggesting potential relationships between habitat complexity and the maintenance of biodiversity via aquatic‐terrestrial reciprocal fluxes and dynamic interdependence across mosaics. 

We hypothesized that environmental variation at the patch scale (1 - 10’s m) would facilitate the co-occurrence of N2 fixation and denitrification through the formation of hot spots in streams. We measured rates of N2 fixation and denitrification and relative abundances of the genes nifH and nirS in patches determined by channel geomorphic units and substrate type in 4 Idaho and 3 Michigan streams encompassing a gradient of N and P concentrations. This data package includes patch-level measurements of N2 fixation and denitrification rates, relative gene abundances of nifH and nirS, and environmental covariates (nutrient concentrations, water temperature, surface and subsurface dissolved oxygen concentrations, organic matter content) that were used to explore the factors that could predict process rates and relative gene abundances across patches and streams. 

Abstract Despite growing interest in conservation and re‐establishment of ecological connectivity, few studies have explored its context‐specific social–ecological outcomes. We aimed to explore social and ecological outcomes to changing stream connectivity for both stakeholders and native fish species impacted by habitat fragmentation and nonnative species. We (1) investigated stakeholder perceptions of the drivers and outcomes of stream connectivity, and (2) evaluated the effects of stakeholder‐identified connectivity and nonnative species scenarios on Yellowstone cutthroat trout (YCT) populations. Our study was conducted in the Teton River, Idaho, USA. We integrated two modeling approaches, mental modeling and individual‐based ecological modeling, to explore social–ecological outcomes for stakeholders and YCT populations. Aggregation of mental models revealed an emergent pattern of increasing complexity as more types of stakeholders were considered, as well as gaps and linkages among different stakeholder knowledge areas. These results highlight the importance of knowledge sharing among stakeholders when making decisions about connectivity. Additionally, the results from the individual‐based models suggested that the potential for a large, migratory life history form of YCT, in addition to self‐preference mating where they overlap with rainbow trout, had the strongest effects on outcomes for YCT. Exploring social and ecological drivers and outcomes to changing connectivity is useful for anticipating and adapting to unintended outcomes, as well as making decisions for desirable outcomes. The results from this study can contribute to the management dialogue surrounding stream connectivity in the Teton River, as well as to our understanding of connectivity conservation and its outcomes more broadly. 

Stream drying and wildfire are projected to increase with climate change in the western United States, and both are likely to impact stream chemistry patterns and processes. To investigate drying and wildfire effects on stream chemistry (carbon, nutrients, anions, cations, and isotopes), we examined seasonal drying in two intermittent streams in southwestern Idaho, one stream that was unburned and one that burned 8 months prior to our study period. During the seasonal recession following snowmelt, we hypothesized that spatiotemporal patterns of stream chemistry would change due to increased evaporation, groundwater dominance, and autochthonous carbon production. With increased nutrients and reduced canopy cover, we expected greater shifts in the burned stream. To capture spatial chemistry patterns, we sampled surface water for a suite of analytes along the length of each stream with a high spatial scope (50-m sampling along ~2,500 m). To capture temporal variation, we sampled each stream in April (higher flow), May, and June (lower flow) in 2016. Seasonal patterns and processes influencing stream chemistry were generally similar in both streams, but some were amplified in the burned stream. Mean dissolved inorganic carbon (DIC) concentrations increased with drying by 22% in the unburned and by 300% in the burned stream. In contrast, mean total nitrogen (TN) concentrations decreased in both streams, with a 16% TN decrease in the unburned stream and a 500% TN decrease (mostly nitrate) in the burned stream. Contrary to expectations, dissolved organic carbon (DOC) concentrations varied more in space than in time. In addition, we found the streams did not become more evaporative relative to the Local Meteoric Water Line (LMWL) and we found weak evidence for evapoconcentration with drying. However, consistent with our expectations, strontium-DIC ratios indicated stream water shifted toward groundwater-dominance, especially in the burned stream. Fluorescence and absorbance measurements showed considerable spatial variation in DOC sourcing each month in both streams, and mean values suggested a temporal shift from allochthonous toward autochthonous carbon sources in the burned stream. Our findings suggest that the effects of fire may magnify some chemistry patterns but not the biophysical controls that we tested with stream drying.